explanatory notebooks

This series of notebooks illustrates the

Robust inference of subcellular objects:

• 1️⃣. Infer cellmask
• 2️⃣. infer nuclei
• 3️⃣. Infer cytoplasm
• 4️⃣. Infer lysosome
• 5️⃣. Infer mitochondria
• 6️⃣. Infer golgi complex
• 7️⃣. Infer peroxisome
• 8️⃣. Infer endoplasmic reticulum
• 9️⃣. Infer lipid body

other examples

• 1️⃣4️⃣. final workflow
• 1️⃣1️⃣. batch process

basics

• 0️⃣0️⃣.1️⃣. framework overview
• 0️⃣0️⃣.1️⃣. pipeline setup

stats

• 1️⃣0️⃣. regionprop stats

workflow .json composition

• 1️⃣2️⃣. function prototoypes
• 1️⃣3️⃣. workflow defs